Paper Abstract and Keywords |
Presentation |
2012-06-28 17:10
[Invited Talk]
Multilevel modeling of physiological systems and nervous systems using PhysioDesigner Yoshiyuki Asai (OIST), Hiroaki Kitano (OIST/Systems Biology Institute) NC2012-12 |
Abstract |
(in Japanese) |
(See Japanese page) |
(in English) |
As new interdisciplinary scientific research fields such as integrated life science is advancing, the importance of mathematical modelings and simulations of multilevel physiological systems are increasing. This article introduces a software application PhysioDesigner and model description language PHML which have been developed for supporting such modeling and simulations. PhysioDesigner provides graphical user interface to build models of physiological functions. Those models created on PhysioDesigner were written in PHML format, which is a specification of XML. Simulations on the models can be done with Flint application which has been developed concurrently with PhysioDesigner. Flint can perform a parallel computing for big simulations. In Physiome.jp, there is a model database of ISML which is XML based modeling language perfectly compatible with PHML. |
Keyword |
(in Japanese) |
(See Japanese page) |
(in English) |
Multilevel modeling / Systems biology / Parallel computing / Integrated physiology / / / / |
Reference Info. |
IEICE Tech. Rep., vol. 112, no. 108, NC2012-12, pp. 93-95, June 2012. |
Paper # |
NC2012-12 |
Date of Issue |
2012-06-21 (NC) |
ISSN |
Print edition: ISSN 0913-5685 Online edition: ISSN 2432-6380 |
Copyright and reproduction |
All rights are reserved and no part of this publication may be reproduced or transmitted in any form or by any means, electronic or mechanical, including photocopy, recording, or any information storage and retrieval system, without permission in writing from the publisher. Notwithstanding, instructors are permitted to photocopy isolated articles for noncommercial classroom use without fee. (License No.: 10GA0019/12GB0052/13GB0056/17GB0034/18GB0034) |
Download PDF |
NC2012-12 |
Conference Information |
Committee |
NC IPSJ-BIO |
Conference Date |
2012-06-28 - 2012-06-29 |
Place (in Japanese) |
(See Japanese page) |
Place (in English) |
OIST, Okinawa |
Topics (in Japanese) |
(See Japanese page) |
Topics (in English) |
Machine Learning Approach to Biodata Mining, and General |
Paper Information |
Registration To |
NC |
Conference Code |
2012-06-NC-BIO |
Language |
Japanese |
Title (in Japanese) |
(See Japanese page) |
Sub Title (in Japanese) |
(See Japanese page) |
Title (in English) |
Multilevel modeling of physiological systems and nervous systems using PhysioDesigner |
Sub Title (in English) |
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Multilevel modeling |
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Systems biology |
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Parallel computing |
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Integrated physiology |
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1st Author's Name |
Yoshiyuki Asai |
1st Author's Affiliation |
Okinawa Institute of Science and Technology (OIST) |
2nd Author's Name |
Hiroaki Kitano |
2nd Author's Affiliation |
OIST/Systems Biology Institute (OIST/Systems Biology Institute) |
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Speaker |
Author-1 |
Date Time |
2012-06-28 17:10:00 |
Presentation Time |
60 minutes |
Registration for |
NC |
Paper # |
NC2012-12 |
Volume (vol) |
vol.112 |
Number (no) |
no.108 |
Page |
pp.93-95 |
#Pages |
3 |
Date of Issue |
2012-06-21 (NC) |
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