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Paper Abstract and Keywords
Presentation 2006-05-24 15:00
DNA Sequence Design Using Hidden Markov Models
Kazuya Maemura, Hirotaka Ono, Kunihiko Sadakane, Masafumi Yamashita (Kyushu Univ.)
Abstract (in Japanese) (See Japanese page) 
(in English) DNA computing is a new computation paradigm to take reaction process of DNA as computation.The design of DNA sequence is a one of crucial research topics in DNA computing.
We have to prepare DNA sequences that satisfy many constraints to react DNA as we expected.In our research, we propose sequence design using Hidden Markov Models.Hidden Markov Model is a stochastic model utilizing Markov process.
In this paper, as a test of this method, we show experiments and their
results of sequence design of DNA whose minimum free energy is small.
Keyword (in Japanese) (See Japanese page) 
(in English) DNA Computing / Sequence Design / Hidden Markov Model / Machine Learning / / / /  
Reference Info. IEICE Tech. Rep., vol. 106, no. 63, COMP2006-15, pp. 39-46, May 2006.
Paper # COMP2006-15 
Date of Issue 2006-05-17 (COMP) 
ISSN Print edition: ISSN 0913-5685
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Conference Information
Committee COMP  
Conference Date 2006-05-24 - 2006-05-24 
Place (in Japanese) (See Japanese page) 
Place (in English) Kyushu Institute of Technology 
Topics (in Japanese) (See Japanese page) 
Topics (in English)  
Paper Information
Registration To COMP 
Conference Code 2006-05-COMP 
Language Japanese 
Title (in Japanese) (See Japanese page) 
Sub Title (in Japanese) (See Japanese page) 
Title (in English) DNA Sequence Design Using Hidden Markov Models 
Sub Title (in English)  
Keyword(1) DNA Computing  
Keyword(2) Sequence Design  
Keyword(3) Hidden Markov Model  
Keyword(4) Machine Learning  
1st Author's Name Kazuya Maemura  
1st Author's Affiliation Kyushu University (Kyushu Univ.)
2nd Author's Name Hirotaka Ono  
2nd Author's Affiliation Kyushu University (Kyushu Univ.)
3rd Author's Name Kunihiko Sadakane  
3rd Author's Affiliation Kyushu University (Kyushu Univ.)
4th Author's Name Masafumi Yamashita  
4th Author's Affiliation Kyushu University (Kyushu Univ.)
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Speaker Author-1 
Date Time 2006-05-24 15:00:00 
Presentation Time 35 minutes 
Registration for COMP 
Paper # COMP2006-15 
Volume (vol) vol.106 
Number (no) no.63 
Page pp.39-46 
Date of Issue 2006-05-17 (COMP) 

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