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Paper Abstract and Keywords
Presentation 2009-05-25 15:00
A Study on Aberration Region Detection for Array CGH Using Nearest Neighbor Multivariate Test
Yuta Ishikawa, Ichiro Takeuchi (Nagoya Inst. of Tech.) NC2009-6
Abstract (in Japanese) (See Japanese page) 
(in English) Array CGH is a useful technology for exhaustively detecting the copy number aberration of the entire genome.
In this paper, we are concerned with the problem of identifying aberration regions that has different copy number alteration properties between two samples.
We propose to use nearest neighbor multivariate test for this purpose.
We discuss the advantage of this approach and demonstrate the effectiveness through an application to previously published malignant array CGH data set on 75 patients.
Keyword (in Japanese) (See Japanese page) 
(in English) array CGH / multivariate test / multiple-compare / permutation test / nearest neighbor / / /  
Reference Info. IEICE Tech. Rep., vol. 109, no. 53, NC2009-6, pp. 31-36, May 2009.
Paper # NC2009-6 
Date of Issue 2009-05-18 (NC) 
ISSN Print edition: ISSN 0913-5685    Online edition: ISSN 2432-6380
Copyright
and
reproduction		 All rights are reserved and no part of this publication may be reproduced or transmitted in any form or by any means, electronic or mechanical, including photocopy, recording, or any information storage and retrieval system, without permission in writing from the publisher. Notwithstanding, instructors are permitted to photocopy isolated articles for noncommercial classroom use without fee. (License No.: 10GA0019/12GB0052/13GB0056/17GB0034/18GB0034)
Download PDF NC2009-6

Conference Information
Committee NC  
Conference Date 2009-05-25 - 2009-05-26 
Place (in Japanese) (See Japanese page) 
Place (in English) OIST, Okinawa 
Topics (in Japanese) (See Japanese page) 
Topics (in English) Machine Learning Approach to Biodata Mining in Biological Phenomena, and General 
Paper Information
Registration To NC 
Conference Code 2009-05-NC 
Language Japanese 
Title (in Japanese) (See Japanese page) 
Sub Title (in Japanese) (See Japanese page) 
Title (in English) A Study on Aberration Region Detection for Array CGH Using Nearest Neighbor Multivariate Test 
Sub Title (in English)  
Keyword(1) array CGH  
Keyword(2) multivariate test  
Keyword(3) multiple-compare  
Keyword(4) permutation test  
Keyword(5) nearest neighbor  
Keyword(6)  
Keyword(7)  
Keyword(8)  
1st Author's Name Yuta Ishikawa  
1st Author's Affiliation Nagoya Institute of Technology (Nagoya Inst. of Tech.)
2nd Author's Name Ichiro Takeuchi  
2nd Author's Affiliation Nagoya Institute of Technology (Nagoya Inst. of Tech.)
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Speaker Author-1 
Date Time 2009-05-25 15:00:00 
Presentation Time 30 minutes 
Registration for NC 
Paper # NC2009-6 
Volume (vol) vol.109 
Number (no) no.53 
Page pp.31-36 
#Pages 6 
Date of Issue 2009-05-18 (NC) 

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